TAP AS2/LOB in Eragrostis tef

Full lineage¹: cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis

Protein source: Tef Improvement Project


The colour code corresponds to the rules for the domains:

should be contained
should not be contained

Domain rules

DUF260
Homeobox
bZIP_1
bZIP_2
HLH

(Domain names are clickable)



List of proteins (48)

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nameClick button to show/hide sequence: Download sequence?
augustus_masked-scaffold10498-abinit-gene-0.1-mRNA-1
augustus_masked-scaffold1053-abinit-gene-0.5-mRNA-1
augustus_masked-scaffold10996-abinit-gene-0.7-mRNA-1
augustus_masked-scaffold1146-abinit-gene-1.1-mRNA-1
augustus_masked-scaffold119-abinit-gene-3.9-mRNA-1
augustus_masked-scaffold2156-abinit-gene-1.0-mRNA-1
augustus_masked-scaffold2680-abinit-gene-0.8-mRNA-1
augustus_masked-scaffold3070-abinit-gene-0.3-mRNA-1
augustus_masked-scaffold3223-abinit-gene-0.10-mRNA-1
augustus_masked-scaffold4261-abinit-gene-0.4-mRNA-1
augustus_masked-scaffold4337-abinit-gene-0.7-mRNA-1
augustus_masked-scaffold474-abinit-gene-1.4-mRNA-1
augustus_masked-scaffold5042-abinit-gene-0.14-mRNA-1
augustus_masked-scaffold642-abinit-gene-0.4-mRNA-1
augustus_masked-scaffold8589-abinit-gene-0.2-mRNA-1
maker-scaffold1134-snap-gene-0.25-mRNA-1
maker-scaffold12935-augustus-gene-0.21-mRNA-1
maker-scaffold1456-augustus-gene-2.31-mRNA-1
maker-scaffold1514-augustus-gene-0.33-mRNA-1
maker-scaffold1808-snap-gene-0.28-mRNA-1
maker-scaffold2840-augustus-gene-1.42-mRNA-1
maker-scaffold3197-snap-gene-0.34-mRNA-1
maker-scaffold3579-snap-gene-0.27-mRNA-1
maker-scaffold371-snap-gene-2.39-mRNA-1
maker-scaffold3710-snap-gene-1.20-mRNA-1
maker-scaffold416-snap-gene-3.31-mRNA-1
maker-scaffold4319-augustus-gene-0.23-mRNA-1
maker-scaffold4795-snap-gene-1.47-mRNA-1
maker-scaffold5049-snap-gene-0.37-mRNA-1
maker-scaffold5273-snap-gene-0.19-mRNA-1
maker-scaffold5600-snap-gene-0.47-mRNA-1
maker-scaffold5814-augustus-gene-0.22-mRNA-1
maker-scaffold6041-augustus-gene-0.16-mRNA-1
maker-scaffold843-snap-gene-0.30-mRNA-1
maker-scaffold8554-augustus-gene-1.17-mRNA-1
maker-scaffold9024-augustus-gene-0.19-mRNA-1
maker-scaffold9268-snap-gene-0.41-mRNA-1
maker-scaffold9457-snap-gene-0.7-mRNA-1
maker-scaffold9780-snap-gene-0.17-mRNA-1
maker-scaffold9823-snap-gene-0.16-mRNA-1
snap_masked-scaffold14408-abinit-gene-0.3-mRNA-1
snap_masked-scaffold1603-abinit-gene-0.22-mRNA-1
snap_masked-scaffold2572-abinit-gene-0.23-mRNA-1
snap_masked-scaffold3736-abinit-gene-0.34-mRNA-1
snap_masked-scaffold3926-abinit-gene-1.10-mRNA-1
snap_masked-scaffold5026-abinit-gene-0.4-mRNA-1
snap_masked-scaffold616-abinit-gene-0.15-mRNA-1
snap_masked-scaffold991-abinit-gene-0.19-mRNA-1
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A list of species letter codes included in the protein names can be found here (opens in new tab).

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¹ Information recieved using NCBI E-utilities and NCBI taxonomy database.
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